Sato-Takabe, Y., Nakajima, Y., Tsukamoto, Y., Hamasaki, K., Shiozaki, T. (2021). Draft Genome Sequence of the Aerobic Anoxygenic Phototrophic Bacterium Roseobacter sp. Strain OBYS 0001, Isolated from Coastal Seawater in Otsuchi Bay, Japan. Microbiology Resource Announcements, 10(28), e00488-21.

Sato-Takabe, Y., Nakajima, Y., Suzuki, S., Sekiguchi, K., Hanada, S., & Shiozaki, T. (2021). Draft Genome Sequences of Putative Aerobic Anoxygenic Phototrophic Bacterial Strains Jannaschia sp. Strains AI_61 and AI_62, Isolated from Seawater around a Coastal Aquaculture Area. Microbiology Resource Announcements, 10(28), e00491-21.

Nakajima, Y., Kojima, K., Kashiyama, Y., Doi, S., Nakai, R., Sudo, Y., Kogure, K., & Yoshizawa, S. (2020). Bacterium lacking a known gene for retinal biosynthesis constructs functional rhodopsins.  Microbes & Environments, 35(4), ME20085

Hasegawa, M., Hosaka, T., Kojima, K., Nishimura, Y., Nakajima, Y., Kimura-Someya, T., Shirouzu, M., Sudo, Y., & Yoshizawa, S. (2020). A unique clade of light-driven proton-pumping rhodopsins evolved in the cyanobacterial lineage. Scientific reports, 10(1), 1-10.
DOI: https://doi.org/10.1038/s41598-020-73606-y

Needham, D. M., Yoshizawa, S., Hosaka, T., Poirier, C., Choi, C. J., Hehenberger, E., Nicholas AT Irwin, N., A., T., Wilken, S., Yung, C. M., Bachy, C., Kurihara, R., Nakajima, Y., Kojima, K., Kimura-Someya, T., Leonard, G., Malmstrom, R., R., Mende, D., R., Olson, D., K., Sudo, Y., Sudek, S., Richards, T., A., DeLong, E., F., Keeling, P., J., Santoro, A., E., Shirouzu, M., Iwasaki, W., & Alexandra Z Worden. (2019). A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators. Proceedings of the National Academy of Sciences, 116(41), 20574-20583.
DOI: https://doi.org/10.1073/pnas.1907517116

Shibukawa, A., Kojima, K., Nakajima, Y., Nishimura, Y., Yoshizawa, S., & Sudo, Y. (2019). Photochemical characterization of a new heliorhodopsin from the gram-negative eubacterium Bellilinea caldifistulae (BcHeR) and comparison with heliorhodopsin-48C12. Biochemistry, 58(26), 2934-2943.
DOI: https://doi.org/10.1021/acs.biochem.9b00257

Wong, S. K., Yoshizawa, S., Nakajima, Y., Cuadra, M. J., Nogi, Y., Nakamura, K., Takami, H., Ogura, Y., Hayashi, T., Chiura, H. X.,  & Hamasaki, K. (2018). Amylibacter kogurei sp. nov., a novel marine alphaproteobacterium isolated from the coastal sea surface microlayer of a marine inlet. International journal of systematic and evolutionary microbiology, 68(9), 2872-2877.
DOI: https://doi.org/10.1099/ijsem.0.002911

Hasegawa, M., Nakajima, Y., Wong, S. K., Nakamura, K., Ogura, Y., Hayashi, T., Kogure, K., & Yoshizawa, S. (2018). Draft Genome Sequence of Saccharospirillum sp. Strain MSK14-1, Isolated from Surface Seawater Collected at Aburatsubo Inlet in Japan. Genome Announc., 6(22), e00469-18.
DOI: 10.1128/genomeA.00469-18

Nakajima, Y., Tsukamoto, T., Kumagai, Y., Ogura, Y., Hayashi, T., Song, J., Kikukawa, T., Demura, M., Kogure, K., Sudo Y., & Yoshizawa, S. (2018). Presence of a haloarchaeal halorhodopsin-like Cl− pump in marine bacteria. Microbes and environments, 33(1), 89-97.　　　解説記事はこちら
DOI: https://doi.org/10.1264/jsme2.ME17197   

Kumagai, Y., Yoshizawa, S., Nakajima, Y., Watanabe, M., Fukunaga, T., Ogura, Y.,Hayashi, T., Oshima, K., Hattori, M., Ikeuchi, M., Kogure, K., DeLong, E., F., Iwasaki, W. (2018). Solar-panel and parasol strategies shape the proteorhodopsin distribution pattern in marine Flavobacteriia. The ISME journal, 12(5), 1329-1343.
DOI: https://doi.org/10.1038/s41396-018-0058-4

Inoue, S., Yoshizawa, S., Nakajima, Y., Kojima, K., Tsukamoto, T., Kikukawa, T., & Sudo, Y. (2018). Spectroscopic characteristics of Rubricoccus marinus xenorhodopsin (RmXeR) and a putative model for its inward H+ transport mechanism. Physical Chemistry Chemical Physics, 20(5), 3172-3183.
DOI: https://doi.org/10.1039/C7CP05033J

Nakajima, Y., Yoshizawa, S., Park, S., Kumagai, Y., Wong, S. K., Ogura, Y., Hayashi, T., & Kogure, K. (2017). Draft Genome Sequence of Rubricoccus marinus SG-29T, a marine bacterium within the family Rhodothermaceae, which contains two different rhodopsin genes. Genome Announc., 5(38), e00990-17.
DOI: 10.1128/genomeA.00990-17

Niho, A., Yoshizawa, S., Tsukamoto, T., Kurihara, M., Tahara, S., Nakajima, Y., Mizuno, M., Kuramochi, H., Tahara, T., Mizutani, Y., & Sudo, Y. (2017). Demonstration of a light-driven SO42–transporter and its spectroscopic characteristics. Journal of the American Chemical Society, 139(12), 4376-4389.
DOI: https://doi.org/10.1021/jacs.6b12139

Nakajima, Y., Yoshizawa, S., Nakamura, K., Ogura, Y., Hayashi, T., & Kogure, K. (2017). Draft Genome Sequences of Tersicoccus phoenicis DSM 30849T, Isolated from a Cleanroom for Spacecraft Assembly, and Tersicoccus sp. Strain Bi-70, Isolated from a Freshwater Lake. Genome Announc., 5(13), e00079-17.

Qiu, X., Mukai, K., Shimasaki, Y., Tsuyama, M., Matsubara, T., Nakashima, T., Ichinose, H., Nakajima, Y., Honjo, I., & Oshima, Y. (2017). Variations in the expression of photosynthesis-related proteins in field Chattonella marina cells during a harmful algal bloom. Journal of the Faculty of Agriculture, Kyushu University, 62(2), 373-380.

Hosaka, T., Yoshizawa, S., Nakajima, Y., Ohsawa, N., Hato, M., DeLong, E. F., Kogure, K., Yokoyama, S., Kimura-Someya, T., Iwasaki, W., & Shirouzu, M. (2016). Structural mechanism for light-driven transport by a new type of chloride ion pump, Nonlabens marinus Rhodopsin-3. Journal of Biological Chemistry, 291(34), 17488-17495.
DOI: 10.1074/jbc.M116.728220

Wong, S. K., Yoshizawa, S., Nakajima, Y., Ogura, Y., Hayashi, T., & Hamasaki, K. (2016). Draft genome sequence of Lewinella sp. strain 4G2 isolated from the coastal sea surface microlayer. Genome Announc., 4(4), e00754-16.
DOI: 10.1128/genomeA.00754-16

Qiu, X., Mukai, K., Shimasaki, Y., Tsuyama, M., Matsubara, T., Nakajima, Y., Honjo, T., & Oshima, Y. (2016). Potential maximum quantum yield of photosystem II reflects the growth rate of Chattonella marina in field bloom samples. Journal of the Faculty of Agriculture, Kyushu University, 61(2), 331-335.

Qiu, X., Shimasaki, Y., Yoshida, Y., Matsubara, T., Yamasaki, Y., Kawaguchi, M., Honda, M., Mouri, K., Nakajima, Y., Tasmin, R., Kuno, K., Kawamura, Y., Honjo, T., Oshima, Y. (2014). Allelopathic effects of Skeletonema spp. may influence interspecific competition and bloom formation of co-occurring harmful flagellates. Journal of the Faculty of Agriculture Kyushu University, 59(2), 373-381.